Questions tagged [diffusion]
20 questions
13
votes
0 answers
What is tantile regression?
My question follows on this discussion of medials and tantiles vs medians and quantiles from earlier this year:
When would we use tantiles and the medial, rather than quantiles and the median?
As described in the link, medials are a measure of…

Mike Hunter
- 9,682
- 2
- 20
- 43
9
votes
1 answer
Theoretical link between the graph diffusion/heat kernel and spectral clustering
The graph diffusion kernel of a Graph is the exponential of its Laplacian $\exp(-\beta L)$ (or a similar expression depending on how you define the kernel). If you have labels on some vertices, you can get labels on the rest of the vertices by a…

highBandWidth
- 2,092
- 2
- 21
- 34
3
votes
0 answers
Increase the number of samples when the PDF is invariant
Background:
$$\frac{\partial C}{\partial t} = D \frac{\partial^2 C}{\partial x^2}$$ is given by Fick's second law, in which $D$ is the diffusion coefficient.
The solution to this equation (given the initial condition) $C(x, t)$
is the probability…

meTchaikovsky
- 1,414
- 1
- 9
- 23
3
votes
0 answers
Diffusion coefficient from double-normal probability density function
The spread of individuals of species is often described by so-called dispersal kernels. The main parameter of spread is then often the variance defined as the average squared movement distance of a specimen per time step (assuming all specimen start…

Johannes
- 155
- 1
- 9
3
votes
2 answers
Probability distribution of the magnitude of a circular bivariate random variable?
I'm very new to this topic. I have a distribution similar to the picture below but with the center at zero.
As I said, I'm very new to this, but if I understand correctly, if there was no hole in the middle, the probability distribution of the…

Maria
- 33
- 3
2
votes
0 answers
Carré du champ operator is a quadratic variation
Let $X_t$ be a real valued Markov process (starting at $x$) with generator $L$. Let $\Gamma(f)$ denote Carré du champ operator i.e. $L(f^2) - 2f \cdot L (f)$. As far as I know under suitable regularity assumptions:
$$ M_t^2 - \int_{0}^{t}…

marcusy
- 33
- 3
2
votes
0 answers
What is the likelihood function of the starting time of diffusion?
I need to find the likelihood that a set of molecules was instantaneously released at time $t_0$, say $t_0=0$.
Toy System Example:
Let $N$ be the set of molecules released from a specific point in a 3D environment. The released molecules diffuse in…

nashynash
- 59
- 9
2
votes
0 answers
How to apply the diffusion maps when the matrix is PSD but not positivity preserving?
In order to apply the diffusion maps in a matrix $C\in\mathbb R^{n\times n}$ , that matrix must obey some restrictions,
C is symmetric: $C_{ij} = C_{ji}$,
C is positivity preserving (PP): $\forall i, j$, $C_{ij}\ge0$,
C is positive semi-definite…

daemon
- 21
- 3
2
votes
1 answer
What is the distribution of the peak time of the first hitting time process
I need to find the distribution of the random variable $T_{peak}$ where $T_{peak}$ represents the peak time of the first hitting time process.
Detailed Explanation of the System:
There are $N^{Tx}$ amount of emitted molecules from a specific point…

fermat4214
- 75
- 6
2
votes
0 answers
Stochastic Differential equation: CAPM
Let $R = (R_1, \dots , R_M)'$ denote a vector of excess returns of $M$ assets observed at $n$ time points, $0 < t_1 < t_2 < \cdots < t_n < T$, within a time span $T > 0$.
We wish to explain the returns through a set of $J$ common tradeable factors,…

bardwell
- 31
- 2
2
votes
0 answers
How to simulate anomalous diffusion of a 1D point like particle?
I want to simulate 3 types of diffusion processes:
normal diffusion $[\langle x^2(t)\rangle \propto t ]$.
subdiffusion $[\langle x^2(t)\rangle \propto t^\alpha ; \alpha<1 ]$
superdiffusion $[\langle x^2(t)\rangle \propto t^\alpha ; \alpha>1]$
I…

0x90
- 687
- 1
- 5
- 17
1
vote
0 answers
Fit drift diffusion model with trial-type dependent input strength
I want to fit a drift diffusion model to a task which involves multiple decisions (n=400) between two different valuable choice options . I do understand how I would do that in general, also with the help of that great tutorial…

Laurie
- 179
- 6
1
vote
0 answers
Diffusion tensor as a covariance matrix
TLDR: In nuclear magnetic resonance (NMR), to study molecular diffusion we assume that molecules displace in 3D space according to a trivariate gaussian distribution. The variables are then the displacements along the 3 directions and the "diffusion…

user241848
- 11
- 2
1
vote
0 answers
Computing properties of non-uniform random walk/diffusion
I have a lot of numerical data which I'm looking to characterise as a (possibly continuous) random walk with variable (in space) step size, for example, along $x$ between $-1$ and $1$ with a step size of $1-x^2$.
In particular I'm interested in the…

Sean D
- 11
- 2
1
vote
0 answers
2 Dimensional Random Walk Simulation
I am trying to simulate random diffusion of particles using a random walk diffusion model. I have used probabilities of movement of particles in a 2D area, to be 1/4 in all 4 directions. The confusion that I am having is whether to assign the corner…

Rizwan Ali
- 11
- 1