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I want to compare measurements in two halves of a behavioral experiment to examine for learning effects. My first course of action is to split the measurements in the two halves and then repeat the original MANOVA for this comparison.

I am asking to find out if there are standard procedures to conduct such a comparison. Or if there are known pitfalls to avoid in such a comparison.

I usually work in R.

kjetil b halvorsen
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Adam SA
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    Can you provide a bit more detail about the response variable and the experimental design? What are the other treatments? If you can provide a few lines of R code that produce an example dataset with the right structure, you're more likely to get some answers. – atiretoo Jul 12 '12 at 17:41

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