The patients with depression had a significant improvement in their severtity of disease after 8 weeks antidepressant treatment and I found the serum BDNF levels of the patients with depression after 8 weeks antidepressant treatment were lower compared to those in baseline.
This study is a uncontrolled observational study, so we do not have a control group. Last month, a reviewer proposed a question that I should calculate the connection of the decrease of the BDNF and the course of treatment, and he thought using paired t test to analyze the data was not appropriate since there were many confounding factors needed to adjust such as length of disease, baseline severtity .
I want to know if I can adjust the mentioned confouding factors when we do not have a control group and how can I calculate the connection of the BDNF decrease and the course of treatment?