I have non-normal plankton community data, where rows are sites and columns are species (dependent) and a few factors.
I want to check the influence of season on community (dis)similarities but am cautious that night and year have an effect. Ideally I would like to determine which factors cause variance and how they might interact.
I have performed a simple anosim to test between seasonal groupings, but want a more comprehensive analysis between all factors. An anosim between day and night suggests it causes 10% of the variance.
After hours (days) of trawling the internet I am quite confused as to how to proceed, if I have missed something simple please point me in the right direction!