Having a set of points $X\in\mathbb{R}^{n\times d}$ and a similarity matrix $S\in \mathbb{R}^{n\times m}$, I am interested in an approximation of the second set of points $U\in \mathbb{R}^{m\times d}$.
$S$ is constructed using some known measurement between the sets $X$ and $U$, e.g. Gaussian RBF or an Euclidean Distance:
$$Z_{ik} = \exp\left(-\frac{||X_i - U_k||^2}{2\sigma^2}\right)$$
Is the task of finding the set $U$ achievable using e.g. Gradient Descent method?